Fish stock assessment
Catch, effort and survey data are fitted in population models to estimate biomass and fishing mortality against reference points, with data-limited methods where records are short.
GCRI · Biodiversity Nexus
Ocean science for marine biodiversity
Ocean science provides the physics, chemistry and biology behind marine biodiversity risk: heat, acidity and oxygen in the water, the currents that connect habitats, and the stock assessments that tell fisheries managers how much can be taken. It links offshore change to coastal habitats and livelihoods.
01Register
Ocean science for marine biodiversity on the record.
Method recordSTEM method
- MethodOcean and coastal science
- StewardOceans and Coasts
- Applied inBiodiversity Nexus
- Data5 inputs
- Checks3 validation steps
- Canonical pageSTEM Commons
02Application
What ocean and coastal science does here.
Ocean science studies the physics, chemistry, biology and geology of the oceans and coasts. It informs sea-level rise, storm surge, marine heatwaves, acidification and fisheries change, all of which affect coastal populations and trade. In biodiversity and nature, climate and hazards and oceans and coasts, ocean projections guide coastal defence, port planning and fisheries management. They link marine hazards to food security, shipping routes and coastal economies. The canonical description is on the STEM Commons.
Marine heatwave and bleaching exposure
Satellite sea surface temperature is compared with the local climatology to compute accumulated heat stress, which is related to observed bleaching and mortality.
Larval connectivity between habitats
Ocean circulation models release virtual larvae to estimate which reefs and nurseries supply others, informing the design of protected area networks.
03Geography
Ocean state in the Amazon Basin.
Marine heat, sea temperature and chlorophyll over the Amazon Basin, from NASA GIBS. Each layer carries its own date.
The interactive map needs JavaScript; the layer list and sources are below.
Layers 3
Ocean state, for this page
About this layer
- Evidence
- Observed
- Source
- GHRSST MUR25 (NASA JPL PO.DAAC)
- Provider
- NASA JPL PO.DAAC
- Licence
- NASA open data
- Vintage
- daily; Satellite analysis
- Newest at build
- 2026-10-12
- Resolution
- about 2 km grid
- Uncertainty
- Satellite analysis of how far sea temperature departs from its usual value for the date shown; a marine heat indicator, not a coral bleaching alert.
- Reached through
- gibs.earthdata.nasa.gov, only after you allow the live map
About this layer
- Evidence
- Observed
- Source
- GHRSST MUR (NASA JPL PO.DAAC)
- Provider
- NASA JPL PO.DAAC
- Licence
- NASA open data
- Vintage
- daily; Satellite analysis
- Newest at build
- 2026-10-12
- Resolution
- about 1 km grid
- Uncertainty
- Gap-filled satellite analysis of sea surface temperature for the date shown; not a reef or species condition report.
- Reached through
- gibs.earthdata.nasa.gov, only after you allow the live map
About this layer
- Evidence
- Observed (clouds and sun glint leave gaps)
- Source
- MODIS Aqua ocean colour (NASA OB.DAAC)
- Provider
- NASA OB.DAAC
- Licence
- NASA open data
- Vintage
- daily; Satellite retrieval; clouds and sun glint leave gaps
- Newest at build
- 2026-10-13
- Resolution
- about 1 km grid
- Uncertainty
- Satellite estimate of chlorophyll-a near the sea surface on the day shown, an indicator of plankton and ocean productivity; not a measure of fish stocks or harmful blooms.
- Reached through
- gibs.earthdata.nasa.gov, only after you allow the live map
About this layer
- Evidence
- Modelled (latest year GIBS publishes)
- Source
- MODIS Terra and Aqua land cover (MCD12Q1) (NASA LP DAAC)
- Provider
- NASA LP DAAC
- Licence
- NASA open data
- Vintage
- yearly; Satellite classification; latest year GIBS publishes
- Newest at build
- 2024-01-01
- Resolution
- about 500 m grid
- Uncertainty
- Satellite land cover classes for the year shown, including croplands; a classification with known errors, not a farm register.
- Reached through
- gibs.earthdata.nasa.gov, only after you allow the live map
About this layer
- Evidence
- Observed
- Source
- VIIRS NOAA-20 corrected reflectance (NASA LANCE)
- Provider
- NASA LANCE
- Licence
- NASA open data
- Vintage
- daily; Satellite image
- Newest at build
- 2026-10-14
- Resolution
- about 250 m grid
- Uncertainty
- Satellite image. Satellite or model raster as the provider publishes it. Clouds, swath gaps and retrieval error leave gaps and noise; values are indicators, not measurements at a place.
- Reached through
- gibs.earthdata.nasa.gov, only after you allow the live map
About this layer
- Evidence
- Observed (clouds leave gaps)
- Source
- MODIS Terra EVI (NASA LANCE)
- Provider
- NASA LANCE
- Licence
- NASA open data
- Vintage
- daily; Satellite index; clouds leave gaps
- Newest at build
- 2026-10-13
- Resolution
- about 250 m grid
- Uncertainty
- Satellite vegetation index for the 8 days to the date shown, a habitat condition indicator; not a measure of species or biodiversity.
- Reached through
- gibs.earthdata.nasa.gov, only after you allow the live map
Keyboard, with the map focused
Hold Ctrl or ⌘ and scroll to zoom
Latest available
NASA GIBS / EOSDIS · ASTER GDEM (METI, NASA) · Blue Marble (NASA) · © OpenStreetMap contributors (ODbL) · Natural Earth
Loading the latest NASA imagery.
Drag to move. Ctrl or ⌘ and scroll, pinch or the buttons to zoom; hover for the values under the pointer; reset returns to the region.
Ocean state, framed on the Amazon Basin.Satellite and model products as NASA publishes them, each with its own date. They are indicators, not assessments of any place.
Data: NASA GIBS · ASTER GDEM · Blue Marble · © OpenStreetMap contributors · Natural Earth · NASA EONET · NASA JPL OPERA DIST-ALERTSources and licences
- We acknowledge the use of imagery provided by services from NASA’s Global Imagery Browse Services (GIBS), part of NASA’s Earth Science Data and Information System (ESDIS). Colours redrawn from the published colour map; values averaged into hexagonal cells where shown (modified). NASA open data
- We acknowledge the use of imagery provided by services from NASA’s Global Imagery Browse Services (GIBS), part of NASA’s Earth Science Data and Information System (ESDIS). Colours redrawn from the published colour map; values averaged into hexagonal cells where shown (modified). NASA open data
- GHRSST Level 4 MUR analyses, NASA Jet Propulsion Laboratory; distributed by the NASA Physical Oceanography DAAC (PO.DAAC); imagery via NASA GIBS. Colours redrawn from the published colour map; values averaged into hexagonal cells where shown (modified). NASA open data
- MODIS Aqua ocean colour, NASA Ocean Biology Processing Group; distributed by the NASA Ocean Biology DAAC (OB.DAAC); imagery via NASA GIBS. Colours redrawn from the published colour map; values averaged into hexagonal cells where shown (modified). NASA open data
- MODIS land products (vegetation indices, gross primary production, land cover), NASA LP DAAC and LANCE; imagery via NASA GIBS. Colours redrawn from the published colour map; values averaged into hexagonal cells where shown (modified). NASA open data
- VIIRS near-real-time products (flood, land surface temperature, snow cover, corrected reflectance), NASA LANCE; imagery via NASA GIBS. Colours redrawn from the published colour map; values averaged into hexagonal cells where shown (modified). NASA open data
- ASTER GDEM is a product of METI and NASA (ASTER Global Digital Elevation Model V003, NASA LP DAAC); imagery via NASA GIBS. Colours redrawn from the published colour map; values averaged into hexagonal cells where shown (modified). Cite as: NASA/METI/AIST/Japan Spacesystems and U.S./Japan ASTER Science Team (2019). ASTER Global Digital Elevation Model V003. doi:10.5067/ASTER/ASTGTM.003. NASA open data
- Made with Natural Earth. Free vector and raster map data @ naturalearthdata.com. Public domain
- © OpenStreetMap contributors (ODbL), via NASA GIBS (coastlines, boundaries, roads and place names). Colours redrawn from the published colour map; values averaged into hexagonal cells where shown (modified). ODbL
- Blue Marble, NASA Earth Observatory; imagery via NASA GIBS. Colours redrawn from the published colour map; values averaged into hexagonal cells where shown (modified). NASA open data
- Context on the globe and flat map: coastlines, boundaries, roads and place names from NASA GIBS reference layers (OpenStreetMap data, ODbL, © OpenStreetMap contributors); Blue Marble imagery as an optional base; 3D terrain and the elevation read-out from the ASTER GDEM elevation colour index (5 m to 200 m classes, exaggerated for legibility). Boundaries are drawn as published and imply no position on any territory.
- Live events: NASA Earth Observatory Natural Event Tracker (EONET); events are indicative and keep their original source links.
- Live: NASA EONET Events are indicative, not authority warnings.
- Observed (EO): NASA JPL OPERA DIST-ALERT (contains modified Copernicus Sentinel data 2026). We acknowledge the use of imagery provided by services from NASA’s Global Imagery Browse Services (GIBS), part of NASA’s Earth Science Data and Information System (ESDIS).
- NASA GIBS: We acknowledge the use of imagery provided by services from NASA’s Global Imagery Browse Services (GIBS), part of NASA’s Earth Science Data and Information System (ESDIS).
- Weather data by Open-Meteo.com (https://open-meteo.com/), licensed under CC BY 4.0 (https://creativecommons.org/licenses/by/4.0/).
- Optional layers (10 sources in the layer list: live, forecast, observed and context) print their provider credit on the map and here when switched on; forecasts are model output and derived indices are estimates.
Layers and dates
- Sea surface temperature anomaly: GHRSST MUR25, NASA JPL PO.DAAC · 12 Oct 2026
- Sea surface temperature: GHRSST MUR, NASA JPL PO.DAAC · 12 Oct 2026
- Ocean chlorophyll-a concentration: MODIS Aqua ocean colour, NASA OB.DAAC · 12 Oct 2026
- Land cover type (IGBP), yearly: MODIS Terra and Aqua land cover (MCD12Q1), NASA LP DAAC · 2024
- True colour: VIIRS NOAA-20 corrected reflectance, NASA LANCE · 13 Oct 2026
- Enhanced vegetation index, rolling 8 days: MODIS Terra EVI, NASA LANCE · 13 Oct 2026
04Data
What the method consumes.
Datasets and records used by ocean and coastal science on this platform, with the role each plays and the label its values carry. Sources are listed in the source register.
| Data | Role | Label |
|---|---|---|
| OBIS marine occurrence records | Species distribution | OBSERVED |
| Copernicus Marine and NOAA Coral Reef Watch | Temperature, heat stress and biogeochemistry | OBSERVED |
| Fisheries catch and survey data | Stock assessment inputs | Published statistics |
| Argo floats and moorings | Subsurface temperature and oxygen | OBSERVED |
| Ocean circulation model output | Connectivity and projections | MODELLED |
05Twin and cascade simulator
Model ocean science for marine biodiversity as a system. Run the cascade.
Assembled from the Nexus Standards area profile Biodiversity and nature risk standards: the hazards it names, the systems and sectors that carry the loss, the controls that dampen it and the data that observe it. Choose the components, pick an initiating hazard and step through the cascade. The Map view places the run on an example geography with open data. Every coupling weight is a stated assumption you can change. A teaching model, not a forecast, an assessment or a certification. To model a place of your own choosing, open the full System Builder.
Hazards
- Deforestation
- Biodiversity loss (set off downstream)
- Soil erosion (set off downstream)
- Land-system change boundary transgression (set off downstream)
- Amazon rainforest dieback (set off downstream)
- Slope slide (set off downstream)
- Flash flood (set off downstream)
- Zoonotic spillover event (set off downstream)
- Wildfire (set off downstream)
- Emerging arbovirus outbreak (set off downstream)
- Malaria resurgence (set off downstream)
Systems and couplings
- Biodiversity and nature risk standards
- Climate risk standards Feedback
- Health risk standards Cascade
- Food and agriculture risk standards Dependency
- Environmental degradation hazard standards Shared hazard records
Controls
NS-0Constitution and principlesNS-1The UNI and the artefact catalogue (grammar v0.2: domain, sector, region and environment segments)NS-3Risk record UNIs (grammar, legacy crosswalk, allocation authority)NS-3bDataset and product metadata profile (STAC, DCAT, PROV-O)NS-5Figure, map and visualisation standard (with the UI/UX kit)NS-9Contextual UNIs (deployments, instances, programme instances)NS-11Verification and monitoring (evidence, attestations, zero-trust conformance observation)NRS-N5Biodiversity and nature risk and resilienceNRS-H65Hazard family: Planetary boundary transgressions (NHS-1 planet.boundary)NRS-H27Hazard family: Biodiversity and species stress (NHS-1 eco.species)NRS-H26Hazard family: Land and wetland degradation (NHS-1 eco.land)NRS-H28Hazard family: Climate-state shifts (NHS-1 eco.climate-state)NRS-H64Hazard family: Ecosystem regime shifts (NHS-1 eco.regime-shift)
Observation
- GBIF occurrence API and downloads (listed for reference)
- World Database on Protected and Conserved Areas (listed for reference)
- Global Forest Watch tree cover loss (Hansen/UMD) and alerts (listed for reference)
- ESA WorldCover 10 m land cover (listed for reference)
- Copernicus Land Monitoring Service products (listed for reference)
- Red List Index
- Forest area as a proportion of total land area
- Proportion of important sites for terrestrial and freshwater biodiversity covered by protected areas
Example geography
- Pacific Island states: 150 hexagonal cells
- Vegetation disturbance alerts, 30 m (OPERA DIST-ALERT), NASA GIBS
- Surface soil moisture (SMAP), NASA GIBS
- Night lights tonight, outages (VIIRS Day/Night Band), NASA GIBS
- Rain rate, last half hour (IMERG), NASA GIBS
06Validation
How results are checked.
Models are checked against tide gauge records, altimetry and in situ profiles. Hindcasts of past storms and heatwaves test predictive skill.
| Check | How it is done |
|---|---|
| Retrospective analysis | Stock assessments are rerun with recent years removed to test for systematic revision |
| Satellite against in-situ | Remotely sensed temperature and ocean colour are compared with mooring and ship data |
| Bleaching hindcast | Heat stress metrics are tested against surveyed past bleaching events |
Coastal processes at fine scale and ice sheet contributions to sea level remain uncertain. Observations of the deep ocean and polar seas are sparse.
07Sector signature
The sector signature of ocean science for marine biodiversity.
The sectors ocean science for marine biodiversity touches and how strongly they depend on each other: what a study has to observe and model together.
Select corners · hover lines6 / 15 relations
Signature
Biodiversity and its partners
Biodiversity gives pollination and soils to food (0.6), watershed regulation to water (0.5) and zoonotic spillover and medicines to health (0.4).
W · E · I · F · H · B
- Sectors
- 4 of 6
- Relations
- 6 of 15
- Coupling
- 0.46 share of total
Strongest relations in play
- Food → Biodiversity · land conversion0.6
- Water → Food · irrigation0.8
- Water → Biodiversity · environmental flows0.6
- Food → Health · nutrition0.7
08Connections
Topics that rely on this method.
09Methods and evidence
How ocean science for marine biodiversity is modelled, measured and tested.
The model, its assumptions, its data and its uncertainty, in the form a scientist or engineer would check. Structures follow published methods. The values drawn are illustrative, not findings.
Earth observation chain
How a satellite or sensor record becomes evidence on ocean science for marine biodiversity, and where each step adds uncertainty.
- 01 · Acquireorbit, sensor and revisitUncertainty: gaps from cloud and orbit
- 02 · Calibrateradiometric and geometricUncertainty: sensor drift
- 03 · Correctatmosphere and terrainUncertainty: aerosol and slope assumptions
- 04 · Retrieve or classifythe variable or the classUncertainty: model and training error
- 05 · Validateagainst ground truthUncertainty: sample design and size
- 06 · Publishwith error bars and lineageUncertainty: stated, never hidden
FAIR guiding principles · GO FAIR and FORCE11W3C PROV · World Wide Web ConsortiumGuidance on consistent treatment of uncertainties · IPCCCEOS Analysis Ready Data · Committee on Earth Observation Satellites
10Stewardship
Who maintains the method.
Oceans and Coasts stewards ocean and coastal science for the Consortium and reviews how it is applied across platforms.
11Process
How the process runs.
Process
Ocean science for marine biodiversity: Flood forecasting and warning chain
The WMO flood forecasting manual and Early Warnings for All describe the chain from forecast to action, across EW4All’s four pillars.
01 Forecast
- 01Rainfall forecastSourceNumerical weather prediction and nowcasts supply rainfall input. Ensembles can apply to weather prediction and hydrological models.
- 02Hydrological modelModel · Protected area authorityA hydrological model turns rainfall into runoff and discharge. The manual covers model choice, parameters and calibration.
- 03Hydraulic modelModelA hydraulic model routes the discharge to water levels along the river and floodplain. The place is set by the page.
- 04Inundation mapsDatasetInundation forecasting combines a level-and-flow model with a digital flood plain surface, the manual’s most sophisticated public service.
02 Warning
- 05ThresholdsGateForecasts are compared with thresholds agreed in advance, as in a threshold-based alert service. Impact-based guidance was not read.
- 06Warning decisionDecision · Protected area authorityThe agency responsible for forecasts and warnings decides on the warning. It should understand the roles of the other agencies concerned.
- 07Warning disseminationStepWarnings are communicated through the channels people use. This is EW4All pillar 3, warning dissemination and communication.
03 Response
- 08Early actionStepPeople and institutions act on the warning. This is EW4All pillar 4, preparedness and response capabilities.
- 09Forecast verificationStepForecasts are verified using hits, misses and false alarms. The manual lists probability of detection, false alarm rate and threat score.
Neutral outline of a published external standard or method, from its issuing body. Not a record of operation. Nexus does not perform, certify or approve any step shown. A gate or decision belongs to the party the source names.
12Connected
Where this page leads across the Consortium.
13Questions
Questions and answers.
What are the limits of ocean and coastal science in this field?
Coastal processes at fine scale and ice sheet contributions to sea level remain uncertain. Observations of the deep ocean and polar seas are sparse.
How are results checked?
Models are checked against tide gauge records, altimetry and in situ profiles. Hindcasts of past storms and heatwaves test predictive skill.
Are the values on this page real?
The data names, roles and checks are real descriptions of practice. The canvas shows a design of the method’s use, not a run; no result is reported here.
Where else is this method applied?
The canonical method page lists every platform that applies it.
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Contribute evidence from this page.
Reports is the Consortium’s quarterly publication. What you know about this subject can become evidence, a case or a correction in the next edition, credited to you and published under CC BY 4.0 where it is your own work.
GCRIBiodiversity NexusGlobal Sector Risk and ResilienceObservatory Signal
- EmailGateway GW-GCRISend it from this pageEvidence, a correction, a case, a method, a review, a translation or profile input. It arrives tagged with this page, so the editor who owns it receives it.
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